updates

README.org

@@ -1,10 +1,10 @@
 * Fschl Emacs
 
-A new start in 2023, initial bootstrap with ~crafted-emacs v2beta~.
+A new start in 2023, initial bootstrap with ~crafted-emacs~.
 
 ** Early setup
 
-1. clone crafted emacs to =~/src/crafted-emacs=, use branch /craftedv2beta/
+1. clone crafted emacs to =~/src/crafted-emacs= 
 2. create the directory links
    #+begin_src bash
      mkdir ~/.config/crafted-emacs-configdir

custom.el

@@ -1,61 +1,39 @@
-;;; custom.el --- fschl-crafted-emacs-config         -*- lexical-binding: t; -*-
+;;; custom.el -- Fschl Crafted Emacs user customization file -*- lexical-binding: t; -*-
+  ;; This file is generated from custom.org. If you want to edit the
+  ;; configuration, DO NOT edit custom.el, edit custom.org, instead.
 
 ;; Copyright (C) 2023  fschl
 
 ;; Author: fschl <fschl@x230-x>
 ;; Keywords: tools, docs
 
-;; basic stuff. we need some more space
+;; Tangle the code blocks to config.el on save.
-(menu-bar-mode -1)
-(tool-bar-mode -1)
-(scroll-bar-mode -1)
-(fset 'yes-or-no-p 'y-or-n-p) ;; shorten yes-no answers
-
 (defun org-babel-tangle-config ()
-  "Tangle all Org-mode files in `user-emacs-directory` after save."
+  (when (string-equal (buffer-file-name)
-  (let ((user-emacs-dir (expand-file-name user-emacs-directory))
+                      (expand-file-name "init.org" user-emacs-directory))
-        (buffer-file (expand-file-name (buffer-file-name))))
+    ;; Dynamic scoping to the rescue
-    (when (and (string-equal (file-name-extension (buffer-file-name)) "org")
+    (let ((org-confirm-babel-evaluate nil))
-               (string-equal (file-name-directory (buffer-file-name)) user-emacs-dir))
+      (org-babel-tangle))))
-      (let ((default-directory user-emacs-dir)
-            (org-confirm-babel-evaluate nil))
-        (org-babel-tangle-file (buffer-file-name))))))
 
 (add-hook 'org-mode-hook
           (lambda ()
             (add-hook 'after-save-hook #'org-babel-tangle-config)))
-
-(custom-set-faces
- ;; custom-set-faces was added by Custom.
- ;; If you edit it by hand, you could mess it up, so be careful.
- ;; Your init file should contain only one such instance.
- ;; If there is more than one, they won't work right.
- '(default ((t (:height 80)))))
-
-
 (custom-set-variables
  ;; custom-set-variables was added by Custom.
  ;; If you edit it by hand, you could mess it up, so be careful.
  ;; Your init file should contain only one such instance.
  ;; If there is more than one, they won't work right.
- '(LaTeX-electric-left-right-brace t)
+ '(Man-notify-method 'aggressive t)
- '(Man-notify-method 'aggressive)
+ '(bookmark-save-flag 1)
- '(TeX-auto-save t)
- '(TeX-electric-math '("$" . "$"))
- '(TeX-electric-sub-and-superscript t)
- '(TeX-parse-self t)
- '(bookmark-save-flag 1 t)
  '(completion-category-overrides '((file (styles partial-completion))))
  '(completion-cycle-threshold 3)
+ '(completion-styles '(orderless basic))
  '(completions-detailed t)
  '(corfu-auto t)
- '(corfu-auto-delay 0.0)
  '(corfu-auto-prefix 2)
  '(corfu-cycle t)
- '(corfu-echo-documentation 0.25 t)
  '(dired-auto-revert-buffer t)
  '(dired-dwim-target t)
- '(dired-listing-switches "-alh")
  '(ediff-window-setup-function 'ediff-setup-windows-plain t)
  '(eglot-autoshutdown t t)
  '(eshell-scroll-to-bottom-on-input 'this t)
@@ -65,16 +43,16 @@
  '(evil-want-C-i-jump nil)
  '(evil-want-integration t)
  '(evil-want-keybinding nil)
+ '(fancy-splash-image "/home/fschl/src/crafted-emacs/system-crafters-logo.png")
  '(fast-but-imprecise-scrolling t)
  '(global-auto-revert-non-file-buffers t)
  '(ibuffer-movement-cycle nil)
  '(ibuffer-old-time 24)
  '(kill-do-not-save-duplicates t)
- '(load-prefer-newer t)
+ '(load-prefer-newer t t)
- '(markdown-enable-html t)
+ '(marginalia-annotators
- '(markdown-enable-math t)
+   '(marginalia-annotators-heavy marginalia-annotators-light nil) t)
  '(org-hide-emphasis-markers t)
- '(org-latex-compiler "xelatex")
  '(org-link-descriptive t)
  '(org-mouse-1-follows-link t)
  '(org-return-follows-link t)
@@ -84,12 +62,7 @@
      ("stable" . 70)
      ("melpa" . 0)))
  '(package-selected-packages
-   '(auctex pandoc-mode markdown-mode combobulate treesit-auto ibuffer-project aggressive-indent editorconfig tree-sitter-langs tree-sitter-ispell tree-sitter-indent tree-sitter eglot magit helpful elisp-demos all-the-icons org-appear denote evil-nerd-commenter evil-collection evil vertico orderless marginalia embark-consult embark corfu-terminal corfu consult cape))
+   '(ob-rust rustic cargo ox-koma-letter ox-latex auctex pandoc-mode markdown-mode ibuffer-project aggressive-indent editorconfig treesit-auto helpful elisp-demos all-the-icons org-appear denote evil-nerd-commenter evil-collection evil vertico orderless marginalia embark-consult embark corfu-terminal corfu consult cape))
- '(reftex-plug-into-AUCTeX t)
- '(safe-local-variable-values
-   '((vc-prepare-patches-separately)
-     (diff-add-log-use-relative-names . t)
-     (vc-git-annotate-switches . "-w")))
  '(scroll-conservatively 101)
  '(scroll-margin 0)
  '(scroll-preserve-screen-position t)
@@ -97,5 +70,10 @@
  '(switch-to-buffer-obey-display-actions t)
  '(tab-always-indent 'complete)
  '(vertico-cycle t)
- '(xref-show-definitions-function 'xref-show-definitions-completing-read t))
+ '(xref-show-definitions-function 'xref-show-definitions-completing-read))
-
+(custom-set-faces
+ ;; custom-set-faces was added by Custom.
+ ;; If you edit it by hand, you could mess it up, so be careful.
+ ;; Your init file should contain only one such instance.
+ ;; If there is more than one, they won't work right.
+ )

fschl-org.el

@@ -1,40 +1,36 @@
 ;;; fschl-org.el -- Fschl Crafted Emacs user customization file -*- lexical-binding: t; -*-
+
 ;; This file is generated from the .org-file with the same name. If you want to edit the
 ;; configuration, DO NOT edit this .el-file, edit .org, instead.
 
-;;(add-to-list 'package-selected-packages 'org-roam)
+;; see variable `org-roam-database-connector`
+;(add-to-list 'package-selected-packages 'emacsql-sqlite-builtin)
+;(add-to-list 'package-selected-packages 'emacsql-sqlite)
+;(add-to-list 'package-selected-packages 'org-roam)
+;(add-to-list 'package-selected-packages 'org-roam-ui)
+(add-to-list 'package-selected-packages 'denote)
 (add-to-list 'package-selected-packages 'ox-latex)
 (add-to-list 'package-selected-packages 'ox-koma-letter)
 (package-install-selected-packages :noconfirm)
 
-;;(setq org-roam-directory (file-truename "~/org-roam"))
+(setq org-default-notes-file "~/Documents/Org/inbox.org")
-;;(org-roam-db-autosync-mode)
+(keymap-global-set "C-c o c" #'org-capture)
+(keymap-global-set "C-c o l" #'org-store-link)
+(keymap-global-set "C-c o a" #'org-agenda)
 
-(keymap-global-set "C-c r r" #'org-capture)
-(keymap-global-set "C-c r l" #'org-store-link)
-(keymap-global-set "C-c r a" #'org-agenda)
 (keymap-global-set "<f7>" #'org-cycle-agenda-files)
+;(keymap-global-set "<f8>" #'find-file org-default-notes-file)
 
-(setq org-default-notes-file "~/Documents/Org/tasks.org")
 (setq org-agenda-files
-      (quote ("~/Documents/Org/tasks.org"
+      (quote ("~/Documents/Org/inbox.org"
               "~/Documents/Org/journal.org"
               "~/Documents/Org/private.org"
               "~/Documents/Org/projects.org"
+              "~/Documents/Org/tasks.org"
               "~/Documents/Org/birthdays.org")))
-
+(setq org-refile-targets '(("~/Documents/Org/projects.org" :maxlevel . 3)
-(setq calendar-week-start-day 1)
+                           ("~/Documents/Org/journal.org" :level . 1)
-(setq calendar-intermonth-text
+                           ("~/Documents/Org/private.org" :maxlevel . 2)))
-      '(propertize
-        (format "%2d"
-                (car
-                 (calendar-iso-from-absolute
-                  (calendar-absolute-from-gregorian (list month day year)))))
-        'font-lock-face 'font-lock-warning-face))
-
-(setq calendar-intermonth-header
-      (propertize "KW"                  ; or e.g. "Wk"
-                  'font-lock-face 'font-lock-keyword-face))
 
 (setq org-todo-keywords
       (quote ((sequence "TODO(t)" "NEXT(n)" "|" "DONE(d)")
@@ -49,6 +45,19 @@
               ("MEETING" :foreground "forest green" :weight bold)
               ("PHONE" :foreground "forest green" :weight bold))))
 
+(setq calendar-week-start-day 1)
+(setq calendar-intermonth-text
+      '(propertize
+        (format "%2d"
+                (car
+                 (calendar-iso-from-absolute
+                  (calendar-absolute-from-gregorian (list month day year)))))
+        'font-lock-face 'font-lock-warning-face))
+
+(setq calendar-intermonth-header
+      (propertize "KW"                  ; or e.g. "Wk"
+                  'font-lock-face 'font-lock-keyword-face))
+
 (eval-after-load 'ox '(require 'ox-koma-letter))
   (eval-after-load 'ox '(require 'ox-moderncv))
   (eval-after-load 'ox '(require 'ox-awesomecv))
@@ -74,12 +83,12 @@
 
 (setq org-capture-templates
       '(("t" "todo list item" entry
-         (file+olp+datetree "~/Documents/Org/tasks.org")
+         (file+olp+datetree "~/Documents/Org/inbox.org")
          "* TODO %?\n SCHEDULED: %^T"
          :tree-type month
          )
         ("T" "todo list item with source" entry
-         (file+olp+datetree "~/Documents/Org/tasks.org")
+         (file+olp+datetree "~/Documents/Org/inbox.org")
          "* TODO %?\n %a \n SCHEDULED: %^T \n %^G \n"
          :tree-type month
          )
@@ -114,16 +123,16 @@
 \
 Frieder Schlesier")
         ("m" "Schedule a meeting" entry
-         (file+headline "~/Documents/Org/tasks.org")
+         (file+headline "~/Documents/Org/inbox.org")
          "* MEETING %?\n SCHEDULED: %^T\n %a"
          )
         ("p" "Schedule a phone call" entry
-         (file+headline "~/Documents/Org/tasks.org")
+         (file+headline "~/Documents/Org/inbox.org")
          "* PHONE %?\n SCHEDULED: %^T\\n %a"
          )
         ("a" "Articles: keep notes of online articles"
          entry
-         (file+datetree "~/Documents/Org/journal.org")
+         (file+olp+datetree "~/Documents/Org/journal.org")
          "* %? \n%x \n %u\n- $?"
          :tree-type month
          :kill-buffer t
@@ -131,6 +140,41 @@ Frieder Schlesier")
         )
       )
 
+;; active Babel languages
+(org-babel-do-load-languages
+ 'org-babel-load-languages
+ '((shell . t)
+   (emacs-lisp . t)
+   (dot . t)))
+
+(setq org-directory "~/Documents/Org/denotes/")
+  (use-package denote
+    :bind
+    ("C-c n n" . 'denote)
+    ("C-c n f" . 'denote-open-or-create)
+    ;; ("C-c n f" . 'my/project-org-file-file)
+    ("C-c n k" . 'denote-keywords-add)    ;; update file name automatically
+    ("C-c n K" . 'denote-keywords-remove) ;; update file name automatically
+    ("C-c n u" . 'denote-rename-file-using-front-matter)
+    ("C-c n l" . 'denote-link-find-backlink)
+    ("C-c n r" . 'my/denote-random-note)
+    :init
+    (setq denote-directory (expand-file-name org-directory))
+    :config
+    (setq denote-known-keywords '("emacs"))
+    (setq denote-prompts '(subdirectory title))
+    (setq denote-excluded-directories-regexp ".attachment")
+
+    ;; Makes the denote links different from usual link.
+    (set-face-attribute 'denote-faces-link
+                        nil :foreground "magenta" :inherit 'link)
+
+    ;; Remove the date and the identifier. They are duplicated with the file name.
+    ;; I want to remove filetags too but denote-keyword-* need that.
+    (setq denote-org-front-matter "#+title: %1$s\n#+filetags: %3$s\n")
+
+    (add-hook 'dired-mode-hook #'denote-dired-mode))
+
 (use-package ox-awesomecv
   :load-path "~/src/org-cv/"
   :init (require 'ox-awesomecv))

fschl-org.org

@@ -5,38 +5,61 @@
 ** Additional Packages
 #+begin_src emacs-lisp
   ;;; fschl-org.el -- Fschl Crafted Emacs user customization file -*- lexical-binding: t; -*-
+
   ;; This file is generated from the .org-file with the same name. If you want to edit the
   ;; configuration, DO NOT edit this .el-file, edit .org, instead.
 
-  ;;(add-to-list 'package-selected-packages 'org-roam)
+  ;; see variable `org-roam-database-connector`
+  ;(add-to-list 'package-selected-packages 'emacsql-sqlite-builtin)
+  ;(add-to-list 'package-selected-packages 'emacsql-sqlite)
+  ;(add-to-list 'package-selected-packages 'org-roam)
+  ;(add-to-list 'package-selected-packages 'org-roam-ui)
+  (add-to-list 'package-selected-packages 'denote)
   (add-to-list 'package-selected-packages 'ox-latex)
   (add-to-list 'package-selected-packages 'ox-koma-letter)
   (package-install-selected-packages :noconfirm)
 #+end_src
 
-** Configure Org-Roam
-#+begin_src emacs-lisp
-;;(setq org-roam-directory (file-truename "~/org-roam"))
-;;(org-roam-db-autosync-mode)
-#+end_src
 ** Setup Org-mode Key Map
 #+begin_src emacs-lisp
-(keymap-global-set "C-c r r" #'org-capture)
+  (setq org-default-notes-file "~/Documents/Org/inbox.org")
-(keymap-global-set "C-c r l" #'org-store-link)
+  (keymap-global-set "C-c o c" #'org-capture)
-(keymap-global-set "C-c r a" #'org-agenda)
+  (keymap-global-set "C-c o l" #'org-store-link)
-(keymap-global-set "<f7>" #'org-cycle-agenda-files)
+  (keymap-global-set "C-c o a" #'org-agenda)
+
+  (keymap-global-set "<f7>" #'org-cycle-agenda-files)
+  (keymap-global-set "<f8>" #'find-file org-default-notes-file)
 #+end_src
 
 ** Setup Agenda Files
 
 #+begin_src emacs-lisp
-  (setq org-default-notes-file "~/Documents/Org/tasks.org")
   (setq org-agenda-files
-        (quote ("~/Documents/Org/tasks.org"
+        (quote ("~/Documents/Org/inbox.org"
                 "~/Documents/Org/journal.org"
                 "~/Documents/Org/private.org"
                 "~/Documents/Org/projects.org"
+                "~/Documents/Org/tasks.org"
                 "~/Documents/Org/birthdays.org")))
+  (setq org-refile-targets '(("~/Documents/Org/projects.org" :maxlevel . 3)
+                             ("~/Documents/Org/journal.org" :level . 1)
+                             ("~/Documents/Org/private.org" :maxlevel . 2)))
+#+end_src
+
+*** Custom TODO keywords
+#+begin_src emacs-lisp
+  (setq org-todo-keywords
+      (quote ((sequence "TODO(t)" "NEXT(n)" "|" "DONE(d)")
+              (sequence "WAITING(w@/!)" "HOLD(h@/!)" "|" "CANCELLED(c@/!)" "PHONE" "MEETING"))))
+(setq org-todo-keyword-faces
+      (quote (("TODO" :foreground "red" :weight bold)
+              ("NEXT" :foreground "blue" :weight bold)
+              ("DONE" :foreground "forest green" :weight bold)
+              ("WAITING" :foreground "orange" :weight bold)
+              ("HOLD" :foreground "magenta" :weight bold)
+              ("CANCELLED" :foreground "forest green" :weight bold)
+              ("MEETING" :foreground "forest green" :weight bold)
+              ("PHONE" :foreground "forest green" :weight bold))))
 #+end_src
 
 *** Add Week to Calendar
@@ -56,22 +79,6 @@
                     'font-lock-face 'font-lock-keyword-face))
 #+end_src
 
-*** Custom TODO keywords
-#+begin_src emacs-lisp
-  (setq org-todo-keywords
-      (quote ((sequence "TODO(t)" "NEXT(n)" "|" "DONE(d)")
-              (sequence "WAITING(w@/!)" "HOLD(h@/!)" "|" "CANCELLED(c@/!)" "PHONE" "MEETING"))))
-(setq org-todo-keyword-faces
-      (quote (("TODO" :foreground "red" :weight bold)
-              ("NEXT" :foreground "blue" :weight bold)
-              ("DONE" :foreground "forest green" :weight bold)
-              ("WAITING" :foreground "orange" :weight bold)
-              ("HOLD" :foreground "magenta" :weight bold)
-              ("CANCELLED" :foreground "forest green" :weight bold)
-              ("MEETING" :foreground "forest green" :weight bold)
-              ("PHONE" :foreground "forest green" :weight bold))))
-#+end_src
-
 ** Setup Capture Templates
 
 - https://orgmode.org/manual/Template-elements.html
@@ -107,12 +114,12 @@
 #+begin_src emacs-lisp
   (setq org-capture-templates
         '(("t" "todo list item" entry
-           (file+olp+datetree "~/Documents/Org/tasks.org")
+           (file+olp+datetree "~/Documents/Org/inbox.org")
            "* TODO %?\n SCHEDULED: %^T"
            :tree-type month
            )
           ("T" "todo list item with source" entry
-           (file+olp+datetree "~/Documents/Org/tasks.org")
+           (file+olp+datetree "~/Documents/Org/inbox.org")
            "* TODO %?\n %a \n SCHEDULED: %^T \n %^G \n"
            :tree-type month
            )
@@ -147,16 +154,16 @@
   \
   Frieder Schlesier")
           ("m" "Schedule a meeting" entry
-           (file+headline "~/Documents/Org/tasks.org")
+           (file+headline "~/Documents/Org/inbox.org")
            "* MEETING %?\n SCHEDULED: %^T\n %a"
            )
           ("p" "Schedule a phone call" entry
-           (file+headline "~/Documents/Org/tasks.org")
+           (file+headline "~/Documents/Org/inbox.org")
            "* PHONE %?\n SCHEDULED: %^T\\n %a"
            )
           ("a" "Articles: keep notes of online articles"
            entry
-           (file+datetree "~/Documents/Org/journal.org")
+           (file+olp+datetree "~/Documents/Org/journal.org")
            "* %? \n%x \n %u\n- $?"
            :tree-type month
            :kill-buffer t
@@ -165,7 +172,108 @@
         )
       #+end_src
 
-** TeX and research
+** extra
+
+#+begin_src emacs-lisp
+    ;; active Babel languages
+    (org-babel-do-load-languages
+     'org-babel-load-languages
+     '((shell . t)
+       (emacs-lisp . t)
+       (dot . t)))
+#+end_src
+* Configure =Org-Roam=                                               :noexport:
+#+begin_src emacs-lisp :tangle no
+    ;; ;; Setting the storage directory:
+    ;; ;; Stores org-roam data in a subdirectory under the emacs directory
+    ;; (customize-set-variable 'org-roam-database-connector "sqlite-builtin")
+    ;; (customize-set-variable 'org-roam-directory (file-truename "~/org-roam"))
+
+  (use-package org-roam
+    :ensure t
+    :load-path "~/src/org-roam/"
+    :custom
+    (org-roam-directory (file-truename "~/org-roam/"))
+    :bind (("C-c n l" . org-roam-buffer-toggle)
+           ("C-c n f" . org-roam-node-find)
+           ("C-c n g" . org-roam-graph)
+           ("C-c n i" . org-roam-node-insert)
+           ("C-c n c" . org-roam-capture))
+           ;; Dailies
+           ;("C-c n j" . org-roam-dailies-capture-today)
+
+    :config
+    ;; If you're using a vertical completion framework, you might want a more informative completion interface
+    (setq org-roam-node-display-template (concat "${title:*} " (propertize "${tags:10}" 'face 'org-tag)))
+    (org-roam-db-autosync-mode)
+    (setq 'org-roam-database-connector "sqlite-builtin")
+
+    ;; ;; If you're using a vertical completion framework, you might want a
+    ;; ;; more informative completion interface:
+    ;; (when (or (bound-and-true-p fido-vertical-mode)
+    ;;           (bound-and-true-p icomplete-vertical-mode)
+    ;;           (bound-and-true-p vertico))
+    ;;   (customize-set-variable 'org-roam-node-display-template
+    ;;                           (concat "${title:*} "
+    ;;                                   (propertize "${tags:10}" 'face 'org-tag))))
+    )
+
+    ;; ;; suggested keymap based on example from project documentation
+    ;; (keymap-global-set "C-c r l" #'org-roam-buffer-toggle)
+    ;; (keymap-global-set "C-c r f" #'org-roam-node-find)
+    ;; (keymap-global-set "C-c r g" #'org-roam-graph)
+    ;; (keymap-global-set "C-c r i" #'org-roam-node-insert)
+    ;; (keymap-global-set "C-c r c" #'org-roam-capture)
+    ;; ;(keymap-global-set "C-c r j" . org-roam-dailies-capture-today)
+    ;; ;(org-roam-db-autosync-mode)
+#+end_src
+
+** And =org-roam-ui=                                                :noexport:
+#+begin_src emacs-lisp :tangle no
+  (use-package org-roam-ui
+    :after org-roam
+    ;; normally we'd recommend hooking orui after org-roam, but since
+    ;; org-roam does not have a hookable mode anymore, you're advised to
+    ;; pick something yourself if you don't care about startup time, use
+    ;; :hook (after-init . org-roam-ui-mode)
+    :config
+    (setq org-roam-ui-sync-theme t
+          org-roam-ui-follow t
+          org-roam-ui-update-on-save t
+          org-roam-ui-open-on-start t))
+#+end_src
+
+* Denote
+#+begin_src emacs-lisp
+(setq org-directory "~/Documents/Org/denotes/")
+  (use-package denote
+    :bind
+    ("C-c n n" . 'denote)
+    ("C-c n f" . 'denote-open-or-create)
+    ;; ("C-c n f" . 'my/project-org-file-file)
+    ("C-c n k" . 'denote-keywords-add)    ;; update file name automatically
+    ("C-c n K" . 'denote-keywords-remove) ;; update file name automatically
+    ("C-c n u" . 'denote-rename-file-using-front-matter)
+    ("C-c n l" . 'denote-link-find-backlink)
+    ("C-c n r" . 'my/denote-random-note)
+    :init
+    (setq denote-directory (expand-file-name org-directory))
+    :config
+    (setq denote-known-keywords '("emacs"))
+    (setq denote-prompts '(subdirectory title))
+    (setq denote-excluded-directories-regexp ".attachment")
+
+    ;; Makes the denote links different from usual link.
+    (set-face-attribute 'denote-faces-link
+                        nil :foreground "magenta" :inherit 'link)
+
+    ;; Remove the date and the identifier. They are duplicated with the file name.
+    ;; I want to remove filetags too but denote-keyword-* need that.
+    (setq denote-org-front-matter "#+title: %1$s\n#+filetags: %3$s\n")
+
+    (add-hook 'dired-mode-hook #'denote-dired-mode))
+#+end_src
+* TeX and research
 
 - Write a CV in org-mode: https://titan-c.gitlab.io/org-cv/
   cloned to Path =~/src/org-cv=